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process spectra

Post-process spectra calculation results.

cfg.processing.spectra provides gating and classification defaults. Selector flags on the CLI choose which outputs run for the current invocation.

Options

Option Meaning
--cfg, -c Load a specific config file
--animate Run only raw spectra animation-file output
--branches Run only branch-tracking output
--classify Run only isolation-score-based branch classification output

If no selector flags are provided, the command runs animation and branch tracking by default. Classification is also included automatically when processing.spectra.isolation_threshold is set in the config.

lst-tools process spectra